Spatio-temporal influence of tundra snow properties on Ku-band (17.2 GHz) backscatter

During the 2010/11 boreal winter, a distributed set of backscatter measurements was collected using a ground-based Ku-band (17.2 GHz) scatterometer system at 26 open tundra sites. A standard snow-sampling procedure was completed after each scan to evaluate local variability in snow layering, depth, density and water equivalent (SWE) within the scatterometer field of view. The shallow depths and large basal depth hoar encountered presented an opportunity to evaluate backscatter under a set of previously untested conditions. Strong Ku-band response was found with increasing snow depth and snow water equivalent (SWE). In particular, co-polarized vertical backscatter increased by 0.82 dB for every 1 cm increase in SWE (R2 = 0.62). While the result indicated strong potential for Ku-band retrieval of shallow snow properties, it did not characterize the influence of sub-scan variability. An enhanced snow-sampling procedure was introduced to generate detailed characterizations of stratigraphy within the scatterometer field of view using near-infrared photography along the length of a 5m trench. Changes in snow properties along the trench were used to discuss variations in the collocated backscatter response. A pair of contrasting observation sites was used to highlight uncertainties in backscatter response related to short length scale spatial variability in the observed tundra environment

An Investigation into the Effects of Variable Lake Ice Properties on Passive and Active Microwave Measurements Over Tundra Lakes Near Inuvik, N.W.T.

The accurate estimation of snow water equivalent (SWE) in the Canadian sub-arctic is integral to climate variability studies and water availability forecasts for economic considerations (drinking water, hydroelectric power generation). Common passive microwave (PM) snow water equivalent (SWE) algorithms that utilize the differences in brightness temperature (Tb) at 37 GHz – 19 GHz falter in lake-rich tundra environments because of the inclusion of lakes within PM pixels. The overarching goal of this research was to investigate the use of multiple platforms and methodologies to observe and quantify the effects of lake ice and sub-ice water on passive microwave emission for the purpose of improving snow water equivalent (SWE) retrieval algorithms. Using in situ snow and ice measurements as input, the Helsinki University of Technology (HUT) multi-layer snow emission model was modified to include an ice layer below the snow layer. Emission for 6.9, 19, 37 and 89 GHz were simulated at horizontal and vertical polarizations, and were validated by high resolution airborne passive microwave measurements coincident with in situ sampling sites over two lakes near Inuvik, Northwest Territories (NWT). Overall, the general magnitude of brightness temperatures were estimated by the HUT model for 6.9 and 19 GHz H/V, however the variability was not. Simulations produced at 37 GHz exhibited the best agreement relative to observed temperatures. However, emission at 37 GHz does not interact with the radiometrically cold water, indicating that ice properties controlling microwave emission are not fully captured by the HUT model. Alternatively, active microwave synthetic aperture radar (SAR) measurements can be used to identify ice properties that affect passive microwave emission. Dual polarized X-band SAR backscatter was utilized to identify ice types by the segmentation program MAGIC (MAp Guided Ice Classification). Airborne passive microwave transects were grouped by ice type classes and compared to backscatter measurements. In freshwater, where there were few areas of high bubble concentration at the ice/water interface Tbs exhibited positive correlations with cross-polarized backscatter, corresponding to ice types (from low to high emission/backscatter: clear ice, transition zone between clear and grey ice, grey ice and rafted ice). SWE algorithms were applied to emission within each ice type producing negative or near zero values in areas of low 19 GHz Tbs (clear ice, transition zone), but also produced positive values that were closer to the range of in situ measurements in areas of high 19 GHz Tbs (grey and rafted ice). Therefore, cross-polarized X-band SAR measurements can be used as a priori ice type information for spaceborne PM algorithms, providing information on ice types and ice characteristics (floating, frozen to bed), integral to future tundra-specific SWE retrieval algorithms

Re-evaluating Scattering Mechanisms in Snow-Covered Freshwater Lake Ice Containing Bubbles Using Polarimetric Ground-based and Spaceborne Radar Data

Lakes are a prominent feature of the sub-Arctic and Arctic regions of North America, covering up to 40% of the landscape. Seasonal ice cover on northern lakes afford habitat for several flora and fauna species, and provide drinking water and overwintering fishing areas for local communities. The presence of lake ice influences lake-atmosphere exchanges by modifying the radiative properties of the lake surface and moderating the transfer of heat to the atmosphere. The thermodynamic aspects of lakes exhibit a pronounced effect on weather and regional climate, but are also sensitive to variability in climate forcings such as air temperature and snow fall, acting as proxy indicators of climate variability and change. To refine the understanding of lake-climate interactions, improved methods of monitoring lake ice properties are needed. Manual lake ice monitoring stations have dropped significantly since the 1990s and existing stations are restricted to populated and coastal regions. Recently, studies have indicated the use of radar remote sensing as a viable option for the monitoring of small lakes in remote regions due to its high spatial resolution and imaging capability independent of solar radiation or cloud cover. Active microwave radar in the frequency range of 5 – 10 GHz have successfully retrieved lake ice information pertaining to the physical status of the ice cover and areas that are frozen to bed, but have not been demonstrated as effective for the derivation of on-ice snow depth. In the 10 – 20 GHz range, radar has been shown to be sensitive to terrestrial snow cover, but has not been investigated over lakes. Utilizing a combination of spaceborne and ground-based radar systems spanning a range of 5 – 17 GHz, simulations from the Canadian Lake Ice Model (CLIMo), and ice thickness information from a shallow water ice profiler (SWIP), this research aimed to further our understanding of lake ice scattering sources and mechanisms for small freshwater lakes in the sub-Arctic. Increased comprehension of scattering mechanisms in ice advances the potential for the derivation of lake ice properties, including on-ice snow depth, lake ice thickness and identification of surface ice types. Field observations of snow-covered lake ice were undertaken during the winter seasons of 2009-2010 and 2010-2011 on Malcolm Ramsay Lake, near Churchill Manitoba. In-situ snow and ice observations were coincident with ground-based scatterometer (UW-Scat) and spaceborne synthetic aperture radar (SAR) acquisitions. UW-Scat was comprised of two fully polarimetric frequency modulated continuous wave (FMCW) radars with centre frequencies of 9.6 and 17.2 GHz (X- and Ku-bands, respectively). SAR observations included fine-beam fully polarimetric RADARSAT-2 acquisitions, obtained coincident to UW-Scat observations during 2009-2010. Three experiments were conducted to characterize and evaluate the backscatter signatures from snow-covered freshwater ice coincident to in-situ snow and ice observations. To better understand the winter backscatter (σ°) evolution of snow covered ice, three unique ice cover scenarios were observed and simulated using a bubbled ice σ° model. The range resolution of UW-SCAT provided separation of microwave interaction at the snow/ice interface (P1), and within the ice volume (P2). Ice cores extracted at the end of the observation period indicated that a considerable σ° increase at P2 of approximately 10 – 12 decibels (dB) HH/VV at X- and Ku-band occurred coincident to the timing of tubular bubble development in the ice. Similarly, complexity of the ice surface (high density micro-bubbles and snow ice) resulted in increased P1 σ° at X- and Ku-band at a magnitude of approximately 7 dB. P1 observations also indicated that Ku-band was sensitive to snowpack overlying lake ice, with σ° exhibiting a 5 (6) dB drop for VV (HH) when ~ 60 mm SWE is removed from the scatterometer field of view. Observations indicate that X-band was insensitive to changes in overlying snowpack within the field of view. A bubbled ice σ° model was developed using the dense medium radiative transfer theory under the Quasi-Crystalline Approximation (DMRT-QCA), which treated bubbles as spherical inclusions within the ice volume. Results obtained from the simulations demonstrated the capability of the DMRT model to simulate the overall magnitude of observed σ° using in-situ snow and ice measurements as input. This study improved understanding of microwave interaction with bubble inclusions incorporated at the ice surface or within the volume. The UW-Scat winter time series was then used to derive ice thickness under the assumption of interactions in range occurring at the ice-snow and ice-water interface. Once adjusted for the refractive index of ice and slant range, the distance between peak returns agreed with in-situ ice thickness observations. Ice thicknesses were derived from the distance of peak returns in range acquired in off-nadir incidence angle range 21 - 60°. Derived ice thicknesses were compared to in-situ measurements provided by the SWIP and CLIMo. Median ice thicknesses derived using UW-Scat X- and Ku-band observations agreed well with in-situ measurements (RMSE = 0.053 and 0.045 m), SWIP (RMSE = 0.082 and 0.088 m) and Canadian Lake Ice Model (CLIMo) simulations using 25% of terrestrial snowpack scenario (RMSE = 0.082 and 0.079), respectively. With the launch of fully polarimetric active microwave satellites and upcoming RADARSAT Constellation Mission (RCM), the utility of polarimetric measurements was observed for freshwater bubbled ice to further investigate scattering mechanisms identified by UW-Scat. The 2009-2010 time series of UW-Scat and RADARSAT-2 (C-band) fully polarimetric observations coincident to in-situ snow and ice measurements were acquired to identify the dominant scattering mechanism in bubbled freshwater lake ice. Backscatter time series at all frequencies show increases from the ice-water interface prior to the inclusion of tubular bubbles in the ice column based on in-situ observations, indicating scattering mechanisms independent of double-bounce scatter, contrary to the longstanding hypothesis of double-bounce scatter off tubular bubbles and the ice-water interface. The co-polarized phase difference of interactions at the ice-water interface from both UW-Scat and SAR observations were centred at 0°, indicating a scattering regime other than double bounce. A Yamaguchi three-component decomposition of the time series suggested the dominant scattering mechanism to be single-bounce off the ice-water interface with appreciable surface roughness or preferentially oriented facets. Overall, this work provided new insight into the scattering sources and mechanisms within snow-covered freshwater lake ice containing spherical and tubular bubbles

Methodological considerations of integrating portable digital technologies in the analysis and management of complex superimposed Californian pictographs: From spectroscopy and spectral imaging to 3-D scanning

How can the utilization of newly developed advanced portable technologies give us greater understandings of the most complex of prehistoric rock art? This is the questions driving The Gordian Knot project analysing the polychrome Californian site known as Pleito. New small transportable devices allow detailed on-site analyses of rock art. These non-destructive portable technologies can use X-ray and Raman technology to determine the chemical elements used to make the pigment that makes the painting; they can use imaging techniques such as Highlight Reflective Transformation Imaging and dStretch© to enhance their visibility; they can use digital imagery to disentangle complex superimposed paintings; and they can use portable laser instruments to analyse the micro-topography of the rock surface and integrate these technologies into a 3-D environment. This paper outlines a robust methodology and preliminary results to show how an integration of different portable technologies can serve rock art research and management

Embedding effective depression care: using theory for primary care organisational and systems change

Background: depression and related disorders represent a significant part of general practitioners (GPs) daily work. Implementing the evidence about what works for depression care into routine practice presents a challenge for researchers and service designers. The emerging consensus is that the transfer of efficacious interventions into routine practice is strongly linked to how well the interventions are based upon theory and take into account the contextual factors of the setting into which they are to be transferred. We set out to develop a conceptual framework to guide change and the implementation of best practice depression care in the primary care setting.Methods: we used a mixed method, observational approach to gather data about routine depression care in a range of primary care settings via: audit of electronic health records; observation of routine clinical care; and structured, facilitated whole of organisation meetings. Audit data were summarised using simple descriptive statistics. Observational data were collected using field notes. Organisational meetings were audio taped and transcribed. All the data sets were grouped, by organisation, and considered as a whole case. Normalisation Process Theory (NPT) was identified as an analytical theory to guide the conceptual framework development.Results: five privately owned primary care organisations (general practices) and one community health centre took part over the course of 18 months. We successfully developed a conceptual framework for implementing an effective model of depression care based on the four constructs of NPT: coherence, which proposes that depression work requires the conceptualisation of boundaries of who is depressed and who is not depressed and techniques for dealing with diffuseness; cognitive participation, which proposes that depression work requires engagement with a shared set of techniques that deal with depression as a health problem; collective action, which proposes that agreement is reached about how care is organised; and reflexive monitoring, which proposes that depression work requires agreement about how depression work will be monitored at the patient and practice level. We describe how these constructs can be used to guide the design and implementation of effective depression care in a way that can take account of contextual differences.Conclusions: ideas about what is required for an effective model and system of depression care in primary care need to be accompanied by theoretically informed frameworks that consider how these can be implemented. The conceptual framework we have presented can be used to guide organisational and system change to develop common language around each construct between policy makers, service users, professionals, and researchers. This shared understanding across groups is fundamental to the effective implementation of change in primary care for depressio

Optimising allied health psychological treatments in primary health care: Piloting a randomised controlled trial of social worker training in focused psychological strategies (The SW-fps Study)

The SW-fps Study was part of a broader body of research which aims to improve access to evidence-based psychological treatments in primary health care. Over the last decade, major mental health reforms in Australia, such as the Better Outcomes and Better Access programs, have greatly increased community access to psychological treatments through a range of funding models designed to support provision of psychological treatments by allied health providers. More recently social workers, amongst other allied health professionals, are beginning to utilise the Medicare incentives to provide psychological treatments in primary mentalThe research reported in this paper is a project of the Australian Primary Health Care Research Institute, which is supported by a grant from the Australian Government Department of Health and Ageing under the Primary Health Care Research, Evaluation and Development Strategy

Optimising the primary mental health care workforce: how can effective psychological treatments for common mental disorders best be delivered in primary health care?

The research reported in this paper is a project of the Australian Primary Health Care Research Institute, which is supported by a grant from the Australian Government Department of Health and Ageing under the Primary Health Care Research, Evaluation and Development Strategy

Applying phylogenomics to understand the emergence of Shiga Toxin producing Escherichia coli O157:H7 strains causing severe human disease in the United Kingdom

Shiga Toxin producing Escherichia coli (STEC) O157:H7 is a recently emerged zoonotic pathogen with considerable morbidity. Since the serotype emerged in the 1980s, research has focussed on unravelling the evolutionary events from the E. coli O55:H7 ancestor to the contemporaneous globally dispersed strains. In this study the genomes of over 1000 isolates from human clinical cases and cattle, spanning the history of STEC O157:H7 in the United Kingdom were sequenced. Phylogenetic analysis reveals the ancestry, key acquisition events and global context of the strains. Dated phylogenies estimate the time to the most recent common ancestor of the current circulating global clone to 175 years ago, followed by rapid diversification. We show the acquisition of specific virulence determinates occurred relatively recently and coincides with its recent detection in the human population. Using clinical outcome data from 493 cases of STEC O157:H7 we assess the relative risk of severe disease including HUS from each of the defined clades in the population and show the dramatic effect Shiga toxin complement has on virulence. We describe two strain replacement events that have occurred in the cattle population in the UK over the last 30 years; one resulting in a highly virulent strain that has accounted for the majority of clinical cases in the UK over the last decade. This work highlights the need to understand the selection pressures maintaining Shiga-toxin encoding bacteriophages in the ruminant reservoir and the study affirms the requirement for close surveillance of this pathogen in both ruminant and human populations

Illness-related suffering and need for palliative care in Rohingya refugees and caregivers in Bangladesh: A cross-sectional study.

BACKGROUND:Despite recognition that palliative care is an essential component of any humanitarian response, serious illness-related suffering continues to be pervasive in these settings. There is very limited evidence about the need for palliative care and symptom relief to guide the implementation of programs to alleviate the burden of serious illness-related suffering in these settings. A basic package of essential medications and supplies can provide pain relief and palliative care; however, the practical availability of these items has not been assessed. This study aimed to describe the illness-related suffering and need for palliative care in Rohingya refugees and caregivers in Bangladesh. METHODS AND FINDINGS:Between November 20 and 24, 2017, we conducted a cross-sectional study of individuals with serious health problems (n = 156, 53% male) and caregivers (n = 155, 69% female) living in Rohingya refugee camps in Bangladesh, using convenience sampling to recruit participants at the community level (i.e., going house to house to identify eligible individuals). The serious health problems, recent healthcare experiences, need for medications and medical supplies, and basic needs of participants were explored through interviews with trained Rohingya community members, using an interview guide that had been piloted with Rohingya individuals to ensure it reflected the specificities of their refugee experience and culture. The most common diagnoses were significant physical disabilities (n = 100, 64.1%), treatment-resistant tuberculosis (TB) (n = 32, 20.5%), cancer (n = 15, 9.6%), and HIV infection (n = 3, 1.9%). Many individuals with serious health problems were experiencing significant pain (62%, n = 96), and pain treatments were largely ineffective (70%, n = 58). The average age was 44.8 years (range 2-100 years) for those with serious health problems and 34.9 years (range 8-75 years) for caregivers. Caregivers reported providing an average of 13.8 hours of care per day. Sleep difficulties (87.1%, n = 108), lack of appetite (58.1%, n = 72), and lack of pleasure in life (53.2%, n = 66) were the most commonly reported problems related to the caregiving role. The main limitations of this study were the use of convenience sampling and closed-ended interview questioning. CONCLUSIONS:In this study we found that many individuals with serious health problems experienced significant physical, emotional, and social suffering due to a lack of access to pain and symptom relief and other essential components of palliative care. Humanitarian responses should develop and incorporate palliative care and symptom relief strategies that address the needs of all people with serious illness-related suffering and their caregivers